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India Microbiome Sequencing Services Market Research Report: By Technology (Sequencing by Litigation (SBL), Sequencing by Synthesis (SBS), Short Gun Sequencing, Targeted Gene Sequencing, RNA Sequencing, Others) andBy Application (Gastrointestinal Diseases, Infectious Diseases, CNS Diseases, Oncology, Others)- Forecast to 2035


ID: MRFR/HC/52152-HCR | 200 Pages | Author: Garvit Vyas| July 2025

India Microbiome Sequencing Services Market Overview:


As per MRFR analysis, the India Microbiome Sequencing Services Market Size was estimated at 94.63 (USD Million) in 2023. The India Microbiome Sequencing Services Market Industry is expected to grow from 104(USD Million) in 2024 to 626 (USD Million) by 2035. The India Microbiome Sequencing Services Market CAGR (growth rate) is expected to be around 17.725% during the forecast period (2025 - 2035).


Key India Microbiome Sequencing Services Market Trends Highlighted


The India Microbiome Sequencing Services Market is experiencing substantial growth as a result of a surge in research concerning gastrointestinal health and its correlation with a variety of diseases. The demand for microbiome analysis is being driven by the increasing prevalence of lifestyle diseases and the growing emphasis on preventive healthcare. The Biotechnology Innovation Partnership Program, a program that supports the advancement of microbiome research, is one of the initiatives that the Indian government has been implementing to promote biotech innovations and genomic research. 


Furthermore, the increasing recognition of personalized medicine has stimulated interest in sequencing services, as healthcare providers and patients are seeking personalized treatment plans that are based on individual microbiomes. In this market, there are significant opportunities for collaboration between academic institutions and private sectors. Indian entrepreneurs are concentrating on microbiome-based products and are establishing potential partnerships with sequencing service providers to develop innovative health solutions. Additionally, the expansion of the healthcare infrastructure in rural areas presents a promising opportunity for microbiome sequencing services, as the greater accessibility of these services can result in enhanced healthcare outcomes in these regions.


 In India, there has been a recent increase in interest in the impact of the microbiome on mental health, which has resulted in the development of new research opportunities and service offerings.The increasing public consciousness of intestinal health and diet has prompted individuals to participate in microbiome testing, which has facilitated the development of consumer-oriented products. Indian companies are also becoming competitive participants in the global market, positioning themselves to attract international collaborations and investment in microbiome sequencing services, thanks to advancements in bioinformatics and data analysis.


India Microbiome Sequencing Services Market Overview


Source: Primary Research, Secondary Research, MRFR Database and Analyst Review


India Microbiome Sequencing Services Market Drivers


Increasing Health Awareness and Personalized Medicine Adoption


In India, there is a notable increase in health awareness among the population, which is a significant driver for the India Microbiome Sequencing Services Market Industry. The Ministry of Health and Family Welfare has reported a consistent rise in preventative healthcare spending by individuals, with a sharp rise of approximately 15% in the last four years. Additionally, the push towards personalized medicine is gaining traction, supported by established organizations like the Indian Council of Medical Research (ICMR) that are working on various initiatives to promote healthcare innovation.


The adoption of microbiome sequencing facilitates tailored healthcare solutions, which can potentially improve patient outcomes across various diseases, including gastrointestinal disorders, obesity, and mental health conditions. This growing focus on individualized treatment plans further propels the demand for advanced microbiome sequencing services in India.


Rising Incidence of Chronic Diseases


The rise in chronic diseases in India serves as a crucial driver for the India Microbiome Sequencing Services Market Industry. According to the National Health Profile, chronic diseases like diabetes and cardiovascular diseases have seen a staggering increase of over 60% in the last decade. With over 77 million people affected by diabetes alone, there is an urgent need for better diagnostic and therapeutic solutions. Organizations such as the All India Institute of Medical Sciences (AIIMS) are actively engaging in research to understand the microbiome's role in chronic disease pathogenesis, consequently driving the reliance on microbiome sequencing services for better health management and treatment efficacy.


Growing Research and Development in Microbiome Studies


Research and Development (R&D) in microbiome studies have significantly accelerated in India, fueling the growth of the India Microbiome Sequencing Services Market Industry. The Department of Biotechnology (DBT) has reported an increase in funding for microbiome research by approximately 25% over the past three years, promoting studies that focus on understanding the human microbiome and its implications on health. Institutions like the Tata Memorial Centre (TMC) and National Institute of Biomedical Genomics (NIBMG) have been at the forefront of microbiome research, contributing valuable data and insights that drive advancements in sequencing technologies.The burgeoning field of microbiome research thus leads to rising demand for sequencing services, facilitating breakthroughs in the healthcare sector.


India Microbiome Sequencing Services Market Segment Insights:


Microbiome Sequencing Services Market Technology Insights


The Technology segment of the India Microbiome Sequencing Services Market is poised for considerable development, driven by advancements in genomic technologies and expanding applications in various fields such as healthcare, agriculture, and environmental science. Sequencing by Litigation (SBL) is notable for its high accuracy and efficiency in analyzing complex microbial communities, making it a valuable tool for researchers and clinicians in understanding various diseases and ecosystem dynamics. Similarly, Sequencing by Synthesis (SBS) has become a preferred method due to its ability to produce large amounts of data rapidly, enabling insights into genomics and metagenomics that are essential for microbial research. 


Moreover, Shotgun Sequencing offers an extensive view of the entire microbial genome, allowing for comprehensive analyses that aid in identifying genetic variations and potential applications in therapeutic interventions. Targeted Gene Sequencing, on the other hand, focuses specifically on certain genes, providing critical insights into microbial functions and disease mechanisms which is crucial for precision medicine initiatives in India. RNA Sequencing is pivotal for understanding gene expression patterns, thus playing an integral role in microbiome studies that seek to unveil the relationship between microbial populations and their host environments.


The Others category encompasses various innovative sequencing technologies and approaches that cater to specialized research needs, reflecting the diversity of applications within the microbiome sequencing landscape. The growing emphasis on personalized medicine, preventative healthcare, and sustainable agricultural practices in India is fueling the demand for these advanced sequencing technologies. 


This evolution not only highlights the importance of technological advancements but also emphasizes the potential for significant contributions toward India's public health and ecological challenges, which are critical for future growth and development in the microbiome sequencing arena. Factors like the increasing investment in Research and Development initiatives, along with a strong governmental push towards biotechnology advancements, are expected to further enhance the positioning of the Technology segment in the India Microbiome Sequencing Services Market landscape as a key driver of innovation and sectoral evolution.


India Microbiome Sequencing Services Market Segment


Source: Primary Research, Secondary Research, MRFR Database and Analyst Review


Microbiome Sequencing Services Market Application Insights


The India Microbiome Sequencing Services Market focuses significantly on the Application segment, which includes critical areas such as Gastrointestinal Diseases, Infectious Diseases, Central Nervous System (CNS) Diseases, and Oncology. These applications play an essential role in advancing healthcare in India by leveraging microbiome data for diagnostics and personalized treatment options. Gastrointestinal Diseases represent a considerable share, influenced by the increasing prevalence of digestive disorders among the Indian population. 


Infectious Diseases are also gaining attention, especially with the rise in antibiotic resistance, prompting the need for novel treatment strategies through microbiome analysis.The CNS Diseases segment is gradually emerging due to growing research on the gut-brain axis, emphasizing the intricate relationship between gut health and neurological functions. Oncology applications are critical as researchers explore the microbiome's role in cancer treatment response and prevention. 


Other areas continue to expand as interdisciplinary approaches enhance understanding of microbiomes across various health conditions. As this market evolves, innovations in sequencing technology and analysis tools are expected to drive opportunities across these applications, addressing healthcare challenges faced in India while fostering significant advancements in disease management and patient care.


India Microbiome Sequencing Services Market Key Players and Competitive Insights:


The India Microbiome Sequencing Services Market is witnessing significant growth driven by increasing awareness and technological advancements in genomic analytics. This market is comprised of various players that specialize in offering microbiome sequencing services, catering to various sectors such as healthcare, pharmaceuticals, agriculture, and environmental research. The competitive landscape consists of both established firms and new entrants that are continuously innovating and expanding their service offerings. 


Stakeholders in this market are focusing on collaborations, mergers, and expanding their geographic reach to capture a larger share of the growing demand. Research and development investments are pivotal as organizations strive to enhance their service capabilities and improve their product portfolios to meet the specific needs of their customers in India.Bioneer Corporation has established a notable presence in the India Microbiome Sequencing Services Market through its focus on cutting-edge technologies and strong research capabilities. 


Its strengths lie in diverse sequencing platforms that cater to a wide array of research needs, making it a preferred partner for academic institutions and research organizations. Bioneer Corporation's commitment to delivering high-quality results and providing exceptional customer support enhances its reputation in the market. The company's competitive edge is further enhanced by its ability to provide customized solutions tailored to the unique research requirements of Indian clientele, driving customer loyalty and long-term collaborations. This particular strength positions Bioneer Corporation as a formidable player in the expanding landscape of microbiome research and sequencing services in India.Zymo Research has carved a substantial niche in the India Microbiome Sequencing Services Market with a range of key products and services that support microbial genomics. 


Known for its innovative sequencing workflows and extraction kits, Zymo Research offers tailored solutions designed to streamline the microbiome research process. The company's strong presence in India is bolstered by its partnerships with local research institutions and universities, facilitating knowledge exchange and enabling efficient service delivery. Zymo Research's strengths include its comprehensive product portfolio, technical expertise, and commitment to quality, which fosters trust among researchers and institutions. The company is also involved in strategic endeavors such as mergers and collaborations to expand its footprint in the Indian market, ensuring that it remains at the forefront of microbiome sequencing advancements and addressing evolving demands from researchers in the region.


Key Companies in the India Microbiome Sequencing Services Market Include:



  • Bioneer Corporation

  • Zymo Research

  • RainDance Technologies

  • Macrogen

  • Eurofins Genomics

  • Genomatix Software

  • Takara Bio

  • Thermo Fisher Scientific

  • Illumina

  • BGI

  • QIAGEN

  • Novogene

  • Oxford Nanopore Technologies

  • Agilent Technologies

  • DNAseq


India Microbiome Sequencing Services Market Industry Developments


The India Microbiome Sequencing Services Market has seen significant developments recently, reflecting advancements and increased interest in the field. Notably, companies like Bioneer Corporation and Illumina are at the forefront of technological innovations, enhancing sequencing capabilities. In October 2023, Eurofins Genomics launched new microbiome analysis services aimed at advancing personalized medicine, aligning with India's healthcare ambitions. Furthermore, growth in the microbiome research sector has been fueled by an increase in investments, particularly in genome sequencing technologies, involving companies like Thermo Fisher Scientific and QIAGEN, which are contributing to a broader understanding of human health and diseases.


In terms of mergers and acquisitions, Macrogen acquired a significant stake in a local bioinformatics firm in July 2023, enhancing its capabilities in India, and enabling the integration of advanced analytics in microbiome research. In the past couple of years, the Indian government has also rolled out initiatives and funding focusing on biotechnology and genomics, facilitating market growth. As of May 2022, the market valuation for microbiome sequencing services in India has expanded significantly, with projected growth rates indicating increasing adoption in clinical applications and research practices across the nation.


India Microbiome Sequencing Services Market Segmentation Insights


Microbiome Sequencing Services Market Technology Outlook



  • Sequencing by Litigation (SBL)

  • Sequencing by Synthesis (SBS)

  • Short Gun Sequencing

  • Targeted Gene Sequencing

  • RNA Sequencing

  • Others


Microbiome Sequencing Services Market Application Outlook



  • Gastrointestinal Diseases

  • Infectious Diseases

  • CNS Diseases

  • Oncology

  • Others

  •  

Report Scope:,,,,,,,,,,,,,
Report Attribute/Metric Source: Details
MARKET SIZE 2018 94.63(USD Million)
MARKET SIZE 2024 104.0(USD Million)
MARKET SIZE 2035 626.0(USD Million)
COMPOUND ANNUAL GROWTH RATE (CAGR) 17.725% (2025 - 2035)
REPORT COVERAGE Revenue Forecast, Competitive Landscape, Growth Factors, and Trends
BASE YEAR 2024
MARKET FORECAST PERIOD 2025 - 2035
HISTORICAL DATA 2019 - 2024
MARKET FORECAST UNITS USD Million
KEY COMPANIES PROFILED Bioneer Corporation, Zymo Research, RainDance Technologies, Macrogen, Eurofins Genomics, Genomatix Software, Takara Bio, Thermo Fisher Scientific, Illumina, BGI, QIAGEN, Novogene, Oxford Nanopore Technologies, Agilent Technologies, DNAseq
SEGMENTS COVERED Technology, Application
KEY MARKET OPPORTUNITIES Rising demand for personalized medicine, Growth in healthcare R&D investments, Expanding applications in agriculture, Increasing awareness of gut health, Advancements in sequencing technology
KEY MARKET DYNAMICS Growing demand for personalized medicine, Increasing government investments in genomics, Rise in healthcare research activities, Advancements in sequencing technologies, Expansion of bioinformatics tools and services
COUNTRIES COVERED India


Frequently Asked Questions (FAQ) :

The India Microbiome Sequencing Services Market is expected to be valued at 104.0 million USD in 2024.

By 2035, the market value is forecasted to reach 626.0 million USD.

The expected CAGR for the market during this period is 17.725 percent.

Sequencing by Synthesis (SBS) is expected to lead, with an anticipated value of 150.0 million USD by 2035.

The market size for Sequencing by Litigation (SBL) is projected to reach 120.0 million USD by 2035.

Major players include Bioneer Corporation, Zymo Research, and Illumina, among others.

RNA Sequencing is expected to be valued at 116.0 million USD by 2035.

The Short Gun Sequencing segment is valued at 18.0 million USD in 2024.

Challenges may include regulatory hurdles and competition among emerging technologies.

There are significant opportunities in healthcare applications and personalized medicine.

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